If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ), 'gf_id' => 'HOM05D000537', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000537' ), 'data_identifier' => 'HOM05D000537', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000537', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1018', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p23170' => 'bna', 'A02p23180' => 'bna', 'A03p51390' => 'bna', 'A05p36920' => 'bna', 'A06p11940' => 'bna', 'A06p19040' => 'bna', 'A06p27810' => 'bna', 'A07p00830' => 'bna', 'A07p26850' => 'bna', 'A07p44910' => 'bna', 'A09p39590' => 'bna', 'A09p61100' => 'bna', 'A09p62700' => 'bna', 'A09p63390' => 'bna', 'A10p16590' => 'bna', 'Aa31LG1G1160' => 'aar', 'Aa31LG3G100' => 'aar', 'Aa31LG4G1040' => 'aar', 'Aa31LG4G17240' => 'aar', 'Aa31LG7G490' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.3348' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2061' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2064' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2070' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2073' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2074' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2080' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2088' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2089' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2090' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2099' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2100' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2102' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2104' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2105' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2107' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2111' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2116' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2117' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2281' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.159' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2272' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1125' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1126' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2883' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2884' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2886' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2890' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2891' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2893' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.848' => 'aag', 'Actinidia02949' => 'ach', 'Actinidia07031' => 'ach', 'Actinidia07738' => 'ach', 'Actinidia07739' => 'ach', 'Actinidia34410' => 'ach', 'Ah.02g111130' => 'amhyb', 'Ah.08g223300' => 'amhyb', 'Ah.10g037200' => 'amhyb', 'Ah.15g097490' => 'amhyb', 'Ah.15g097500' => 'amhyb', 'Ah.16g102380' => 'amhyb', 'Ah.16g102390' => 'amhyb', 'Ah.16g102400' => 'amhyb', 'AL1G25590' => 'aly', 'AL1G28074' => 'aly', 'AL1G51840' => 'aly', 'AL2G10810' => 'aly', 'AL2G40600' => 'aly', 'AL2G40630' => 'aly', 'AL3G24190' => 'aly', 'AL5G19470' => 'aly', 'AL5G28090' => 'aly', 'AL6G39180' => 'aly', 'AL8G35840' => 'aly', 'Aqoxy1G00930' => 'aox', 'Aqoxy1G00931' => 'aox', 'Aqoxy1G00932' => 'aox', 'Aqoxy1G02419' => 'aox', 'Aqoxy1G03756' => 'aox', 'Aqoxy1G03759' => 'aox', 'Aqoxy2G02158' => 'aox', 'Aqoxy2G02159' => 'aox', 'Aqoxy2G02160' => 'aox', 'Aqoxy2G02187' => 'aox', 'Aqoxy2G02193' => 'aox', 'Aqoxy2G02202' => 'aox', 'Aqoxy2G02206' => 'aox', 'Aqoxy2G02207' => 'aox', 'Aqoxy2G02212' => 'aox', 'Aqoxy4G00086' => 'aox', 'Aqoxy4G00087' => 'aox', 'Aqoxy4G01563' => 'aox', 'Aqoxy4G01566' => 'aox', 'Aqoxy4G03001' => 'aox', 'Aqoxy5G03686' => 'aox', 'Aqoxy5G04342' => 'aox', 'Aqoxy6G01403' => 'aox', 'Aqoxy6G01515' => 'aox', 'Aqoxy6G01516' => 'aox', 'Aqoxy6G02865' => 'aox', 'Aqoxy7G01982' => 'aox', 'Aqoxy7G03457' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0692WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B9Y88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75KK9J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CV26RK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DNZ3MM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FWK0Y0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HS1Y4C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5AP2X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JGRE33' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PHFK3I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PPMM0K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QWDB2Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S7J6Q0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U4IPB2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGI48X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WME1RR' => 'arhy', 'AT1G13790' => 'ath', 'AT1G15910' => 'ath', 'AT1G80790' => 'ath', 'AT2G16490' => 'ath', 'AT3G12550' => 'ath', 'AT3G29375' => 'ath', 'AT3G48670' => 'ath', 'AT4G00380' => 'ath', 'AT4G01180' => 'ath', 'AT4G01780' => 'ath', 'AT5G59390' => 'ath', 'ATR0195G001' => 'atr', 'ATR0559G045' => 'atr', 'ATR0559G112' => 'atr', 'ATR0559G177' => 'atr', 'ATR0559G223' => 'atr', 'ATR0564G481' => 'atr', 'ATR0585G010' => 'atr', 'Atru.chr11.1941' => 'acertr', 'Atru.chr12.429' => 'acertr', 'Atru.chr12.430' => 'acertr', 'Atru.chr12.760' => 'acertr', 'Atru.chr12.784' => 'acertr', 'Atru.chr3.3857' => 'acertr', 'Atru.chr3.3927' => 'acertr', 'Atru.chr3.3928' => 'acertr', 'Atru.chr3.3932' => 'acertr', 'Atru.chr3.3934' => 'acertr', 'Atru.chr3.3935' => 'acertr', 'Atru.chr3.3940' => 'acertr', 'Atru.chr5.316' => 'acertr', 'Atru.chr6.24' => 'acertr', 'Atru.chr6.25' => 'acertr', 'AUR62001777' => 'cqu', 'AUR62006872' => 'cqu', 'AUR62008109' => 'cqu', 'AUR62008110' => 'cqu', 'AUR62008111' => 'cqu', 'AUR62008112' => 'cqu', 'AUR62009565' => 'cqu', 'AUR62012099' => 'cqu', 'AUR62012100' => 'cqu', 'AUR62012101' => 'cqu', 'AUR62012102' => 'cqu', 'AUR62012103' => 'cqu', 'AUR62028687' => 'cqu', 'AUR62028688' => 'cqu', 'AUR62028689' => 'cqu', 'AUR62028690' => 'cqu', 'AUR62028691' => 'cqu', 'AUR62039365' => 'cqu', 'AUR62039366' => 'cqu', 'AUR62039367' => 'cqu', 'BcaB01g00790' => 'bca', 'BcaB02g07248' => 'bca', 'BcaB02g10057' => 'bca', 'BcaB03g14512' => 'bca', 'BcaB04g17114' => 'bca', 'BcaB04g17115' => 'bca', 'BcaB05g25229' => 'bca', 'BcaB05g25230' => 'bca', 'BcaB06g25532' => 'bca', 'BcaB08g34328' => 'bca', 'BcaB08g36262' => 'bca', 'BcaB08g37454' => 'bca', 'BcaC01g02354' => 'bca', 'BcaC03g15933' => 'bca', 'BcaC04g19779' => 'bca', 'BcaC04g21275' => 'bca', 'BcaC05g29258' => 'bca', 'BcaC06g30575' => 'bca', 'BcaC06g36650' => 'bca', 'BcaC07g37456' => 'bca', 'BcaC07g39349' => 'bca', 'BcaC07g41466' => 'bca', 'BcaC07g41473' => 'bca', 'BcaC07g41622' => 'bca', 'BcaC07g41672' => 'bca', 'BcaC08g45339' => 'bca', 'BcaC08g47547' => 'bca', 'BcaNung02717' => 'bca', 'BcaNung02718' => 'bca', 'BolC2t06107H' => 'bol', 'BolC2t09706H' => 'bol', 'BolC2t09708H' => 'bol', 'BolC3t18891H' => 'bol', 'BolC5t30143H' => 'bol', 'BolC5t34203H' => 'bol', 'BolC6t38116H' => 'bol', 'BolC6t40389H' => 'bol', 'BolC7t40587H' => 'bol', 'BolC7t45482H' => 'bol', 'BolC7t45483H' => 'bol', 'BolC8t47776H' => 'bol', 'BolC8t49997H' => 'bol', 'BolC8t52016H' => 'bol', 'BolC8t52175H' => 'bol', 'BolC8t52222H' => 'bol', 'BolC9t58041H' => 'bol', 'BraA01t00719Z' => 'bra', 'BraA02t07314Z' => 'bra', 'BraA02t07315Z' => 'bra', 'BraA03t14221Z' => 'bra', 'BraA05t22491Z' => 'bra', 'BraA06t24364Z' => 'bra', 'BraA06t24987Z' => 'bra', 'BraA06t25720Z' => 'bra', 'BraA07t27880Z' => 'bra', 'BraA07t27881Z' => 'bra', 'BraA07t30329Z' => 'bra', 'BraA09t39457Z' => 'bra', 'BraA09t41484Z' => 'bra', 'BraA09t41635Z' => 'bra', 'BraA09t41689Z' => 'bra', 'BraA10t43743Z' => 'bra', 'C02p36930' => 'bna', 'C02p36940' => 'bna', 'C03p66190' => 'bna', 'C05p14120' => 'bna', 'C05p55370' => 'bna', 'C06p29500' => 'bna', 'C06p53710' => 'bna', 'C07p49800' => 'bna', 'C07p49810' => 'bna', 'C08p09270' => 'bna', 'C08p23670' => 'bna', 'C08p44700' => 'bna', 'C08p46260' => 'bna', 'C08p46270' => 'bna', 'C08p46870' => 'bna', 'C09p51800' => 'bna', 'CAN.G1013.30' => 'can', 'CAN.G11.9' => 'can', 'CAN.G1120.1' => 'can', 'CAN.G169.1' => 'can', 'CAN.G250.3' => 'can', 'CAN.G250.7' => 'can', 'CAN.G292.9' => 'can', 'CAN.G296.11' => 'can', 'CAN.G305.61' => 'can', 'CAN.G383.14' => 'can', 'CAN.G394.60' => 'can', 'CAN.G407.54' => 'can', 'CAN.G515.4' => 'can', 'CAN.G62.41' => 'can', 'CAN.G702.4' => 'can', 'CAN.G937.1' => 'can', 'CANSAT54G1436' => 'cansat', 'CANSAT54G3037' => 'cansat', 'CANSAT56G0413' => 'cansat', 'CANSAT56G1542' => 'cansat', 'CANSAT56G1573' => 'cansat', 'CANSAT56G2603' => 'cansat', 'CANSAT56G3089' => 'cansat', 'CARHR014180' => 'chi', 'CARHR016420' => 'chi', 'CARHR038470' => 'chi', 'CARHR038490' => 'chi', 'CARHR038500' => 'chi', 'CARHR041350' => 'chi', 'CARHR073690' => 'chi', 'CARHR073720' => 'chi', 'CARHR087050' => 'chi', 'CARHR157420' => 'chi', 'CARHR180570' => 'chi', 'CARHR216550' => 'chi', 'CARHR285760' => 'chi', 'Carub.0001s1350' => 'cru', 'Carub.0001s1571' => 'cru', 'Carub.0002s2675' => 'cru', 'Carub.0002s2677' => 'cru', 'Carub.0003s1189' => 'cru', 'Carub.0005s1481' => 'cru', 'Carub.0008s2006' => 'cru', 'Ca_01322_v3' => 'car', 'Ca_05889_v3' => 'car', 'Ca_08168_v3' => 'car', 'Ca_13882_v3' => 'car', 'Ca_13895_v3' => 'car', 'Ca_23211_v3' => 'car', 'Ca_23221_v3' => 'car', 'Cc01_g12950' => 'ccan', 'Cc02_g07680' => 'ccan', 'Cc02_g07690' => 'ccan', 'Cc02_g07700' => 'ccan', 'Cc02_g07710' => 'ccan', 'Cc02_g07720' => 'ccan', 'Cc02_g27460' => 'ccan', 'Cc02_g27900' => 'ccan', 'Cc03_g13660' => 'ccan', 'Cc04_g05000' => 'ccan', 'CDE03G0514' => 'cde', 'CDE04G0022' => 'cde', 'CDE04G3239' => 'cde', 'Cfa000027' => 'cfa', 'Cfa001459' => 'cfa', 'Cfa001460' => 'cfa', 'Cfa005480' => 'cfa', 'Cfa011512' => 'cfa', 'Cfa012700' => 'cfa', 'Cfa012702' => 'cfa', 'Ciclev10000571m.g' => 'ccl', 'Ciclev10025142m.g' => 'ccl', 'Ciclev10029911m.g' => 'ccl', 'Ciclev10030937m.g' => 'ccl', 'Ciclev10033798m.g' => 'ccl', 'CiPaw.01G288600' => 'cil', 'CiPaw.02G161400' => 'cil', 'CiPaw.02G184800' => 'cil', 'CiPaw.13G093400' => 'cil', 'ClCG03G001460' => 'cla', 'ClCG07G003400' => 'cla', 'ClCG09G009680' => 'cla', 'COL.COLO4_15061' => 'col', 'COL.COLO4_18521' => 'col', 'COL.COLO4_18777' => 'col', 'COL.COLO4_26678' => 'col', 'COL.COLO4_32991' => 'col', 'COL.COLO4_32992' => 'col', 'Cpa.g.sc1.418' => 'cpa', 'Cpa.g.sc10.88' => 'cpa', 'Cpa.g.sc81.135' => 'cpa', 'Cpa.g.sc81.136' => 'cpa', 'CsaV3_5G008130' => 'csa', 'CsaV3_7G025070' => 'csa', 'CSS0000741' => 'camsi', 'CSS0004106' => 'camsi', 'CSS0013018' => 'camsi', 'CSS0022930' => 'camsi', 'CSS0036686' => 'camsi', 'CSS0037806' => 'camsi', 'CSS0040583' => 'camsi', 'CSS0045683' => 'camsi', 'DCAR_001854' => 'dca', 'DCAR_010382' => 'dca', 'DCAR_010387' => 'dca', 'DCAR_011713' => 'dca', 'DCAR_012333' => 'dca', 'DCAR_018905' => 'dca', 'DCAR_018911' => 'dca', 'DCAR_019107' => 'dca', 'DCAR_019329' => 'dca', 'DCAR_021364' => 'dca', 'DCAR_026156' => 'dca', 'DCAR_027514' => 'dca', 'DCAR_028489' => 'dca', 'DCAR_031268' => 'dca', 'DCAR_032353' => 'dca', 'Dinv02218' => 'din', 'Dinv02219' => 'din', 'Dinv03039' => 'din', 'Dinv04172' => 'din', 'Dinv04173' => 'din', 'Dinv17011' => 'din', 'Dinv23294' => 'din', 'Dinv23295' => 'din', 'Dinv26027' => 'din', 'Dinv42960' => 'din', 'Dinv43139' => 'din', 'Duzib114G0218' => 'dzi', 'Duzib114G0333' => 'dzi', 'Duzib114G0886' => 'dzi', 'Duzib114G0908' => 'dzi', 'Duzib114G0977' => 'dzi', 'Duzib114G1005' => 'dzi', 'Duzib150G0788' => 'dzi', 'ECA232G4779' => 'eca', 'ECA233G4836' => 'eca', 'ECA233G6242' => 'eca', 'ECA236G0987' => 'eca', 'ECA236G4734' => 'eca', 'ECA238G2608' => 'eca', 'ECA247G3586' => 'eca', 'EL10Ac2g04734' => 'bvu', 'EL10Ac2g04736' => 'bvu', 'EL10Ac5g10615' => 'bvu', 'EL10Ac7g16028' => 'bvu', 'Eucgr.B02356' => 'egr', 'Eucgr.B02359' => 'egr', 'Eucgr.F03952' => 'egr', 'Eucgr.G02937' => 'egr', 'FAN01G1116' => 'fan', 'FAN01G2968' => 'fan', 'FAN02G0231' => 'fan', 'FAN03G0173' => 'fan', 'FAN03G0806' => 'fan', 'FAN03G2413' => 'fan', 'FAN05G0028' => 'fan', 'FAN06G1487' => 'fan', 'FAN06G1934' => 'fan', 'FAN09G3969' => 'fan', 'FAN10G0949' => 'fan', 'FAN11G0063' => 'fan', 'FAN11G0897' => 'fan', 'FAN11G1167' => 'fan', 'FAN11G1648' => 'fan', 'FAN11G2032' => 'fan', 'FAN11G3193' => 'fan', 'FAN14G0095' => 'fan', 'FAN16G0592' => 'fan', 'FAN16G1233' => 'fan', 'FAN19G1168' => 'fan', 'FAN21G2387' => 'fan', 'FAN21G2893' => 'fan', 'FAN23G0862' => 'fan', 'FAN23G2346' => 'fan', 'FAN25G2952' => 'fan', 'FAN25G3553' => 'fan', 'FAN26G1493' => 'fan', 'FAN26G1732' => 'fan', 'FAN28G1085' => 'fan', 'FvH4_1g01090' => 'fve', 'FvH4_3g24990' => 'fve', 'FvH4_3g36240' => 'fve', 'FvH4_3g36250' => 'fve', 'FvH4_3g36251' => 'fve', 'FvH4_3g36252' => 'fve', 'FvH4_3g36253' => 'fve', 'FvH4_3g36270' => 'fve', 'FvH4_3g36300' => 'fve', 'FvH4_6g28780' => 'fve', 'FvH4_7g22690' => 'fve', 'Glyma.02G248400' => 'gma', 'Glyma.04G148500' => 'gma', 'Glyma.07G024100' => 'gma', 'Glyma.07G024801' => 'gma', 'Glyma.08G217500' => 'gma', 'Glyma.08G269000' => 'gma', 'Glyma.11G219200' => 'gma', 'Glyma.13G336500' => 'gma', 'Glyma.14G068100' => 'gma', 'Glyma.15G037800' => 'gma', 'Glyma.15G204733' => 'gma', 'Glyma.15G204933' => 'gma', 'Glyma.16G133400' => 'gma', 'Glyma.18G038200' => 'gma', 'Glyma.18G038300' => 'gma', 'Gohir.A05G119900' => 'ghi', 'Gohir.A05G349100' => 'ghi', 'Gohir.A06G072950' => 'ghi', 'Gohir.A06G166800' => 'ghi', 'Gohir.A06G167100' => 'ghi', 'Gohir.A10G220200' => 'ghi', 'Gohir.A13G227232' => 'ghi', 'Gohir.D02G086666' => 'ghi', 'Gohir.D02G194100' => 'ghi', 'Gohir.D05G120900' => 'ghi', 'Gohir.D06G172350' => 'ghi', 'Gohir.D06G172500' => 'ghi', 'Gohir.D08G206332' => 'ghi', 'Gohir.D10G107400' => 'ghi', 'Gohir.D10G230050' => 'ghi', 'Gohir.D10G230100' => 'ghi', 'Gohir.D10G231000' => 'ghi', 'Gohir.D10G231200' => 'ghi', 'Gohir.D12G056600' => 'ghi', 'Gohir.D13G232600' => 'ghi', 'Gorai.003G109500' => 'gra', 'Gorai.005G097500' => 'gra', 'Gorai.005G216900' => 'gra', 'Gorai.008G059600' => 'gra', 'Gorai.009G124400' => 'gra', 'Gorai.010G201300' => 'gra', 'Gorai.010G201400' => 'gra', 'Gorai.011G117800' => 'gra', 'Gorai.011G262700' => 'gra', 'Gorai.011G262900' => 'gra', 'Gorai.011G264300' => 'gra', 'Gorai.011G265400' => 'gra', 'Gorai.012G071000' => 'gra', 'Gorai.013G263400' => 'gra', 'GSVIVG01010889001' => 'vvi', 'GSVIVG01010892001' => 'vvi', 'GSVIVG01016527001' => 'vvi', 'GSVIVG01016528001' => 'vvi', 'GSVIVG01024947001' => 'vvi', 'HanXRQChr01g0019461' => 'han', 'HanXRQChr02g0049151' => 'han', 'HanXRQChr04g0098651' => 'han', 'HanXRQChr04g0098751' => 'han', 'HanXRQChr04g0098871' => 'han', 'HanXRQChr04g0098881' => 'han', 'HanXRQChr05g0134911' => 'han', 'HanXRQChr05g0134941' => 'han', 'HanXRQChr05g0134951' => 'han', 'HanXRQChr05g0148061' => 'han', 'HanXRQChr05g0148091' => 'han', 'HanXRQChr06g0178711' => 'han', 'HanXRQChr07g0201371' => 'han', 'HanXRQChr08g0217891' => 'han', 'HanXRQChr08g0220791' => 'han', 'HanXRQChr14g0427471' => 'han', 'HanXRQChr16g0522001' => 'han', 'Haze_01825' => 'cav', 'Haze_07027' => 'cav', 'Haze_07931' => 'cav', 'Haze_08853' => 'cav', 'Haze_17080' => 'cav', 'Haze_24107' => 'cav', 'Hma1.2p1_0109F.1_g052340' => 'hma', 'Hma1.2p1_0953F.1_g241160' => 'hma', 'Hma1.2p1_1542F.1_g289740' => 'hma', 'HPP92_003257' => 'vpl', 'HPP92_006620' => 'vpl', 'Hund02798' => 'sun', 'Hund04950' => 'sun', 'Hund09473' => 'sun', 'Hund13771' => 'sun', 'Hund13772' => 'sun', 'Hund13773' => 'sun', 'Hund13774' => 'sun', 'Hund13775' => 'sun', 'Hund13776' => 'sun', 'Hund18902' => 'sun', 'Lalb_Chr04g0264381' => 'lal', 'Lalb_Chr17g0346241' => 'lal', 'Lalb_Chr18g0053241' => 'lal', 'Lalb_Chr18g0053251' => 'lal', 'Lalb_Chr20g0116931' => 'lal', 'Lalb_Chr24g0394121' => 'lal', 'Lalb_Chr25g0278941' => 'lal', 'Lj1C151T9' => 'lonja', 'Lj1C939T14' => 'lonja', 'Lj1C939T2' => 'lonja', 'Lj1C940G3' => 'lonja', 'Lj2A1063T75' => 'lonja', 'Lj3g0006322' => 'lja', 'Lj3g0017483' => 'lja', 'Lj3g0025879' => 'lja', 'Lj6g0000614' => 'lja', 'Lj6g0000813' => 'lja', 'Lj6g0001534' => 'lja', 'Lj6g0005806' => 'lja', 'Lj6g0006096' => 'lja', 'Lj6g0006696' => 'lja', 'Lj6g0011782' => 'lja', 'Lj6g0012433' => 'lja', 'Lj6g0013516' => 'lja', 'Lj6g0015225' => 'lja', 'Lj6g0018403' => 'lja', 'Lj6g0021426' => 'lja', 'Lj6g0021483' => 'lja', 'Lj6g0024192' => 'lja', 'Lj6g0026163' => 'lja', 'Lj8A83G57' => 'lonja', 'Lj8C83G18' => 'lonja', 'Lj9C495T3' => 'lonja', 'LjContig00141g0012250' => 'lja', 'Lsat_1_v5_gn_1_32040' => 'lsa', 'Lsat_1_v5_gn_1_32080' => 'lsa', 'Lsat_1_v5_gn_2_119300' => 'lsa', 'Lsat_1_v5_gn_4_133680' => 'lsa', 'Lsat_1_v5_gn_5_170120' => 'lsa', 'Lsat_1_v5_gn_5_170380' => 'lsa', 'Lsat_1_v5_gn_5_170401' => 'lsa', 'Lsat_1_v5_gn_5_170421' => 'lsa', 'Lsat_1_v5_gn_5_170441' => 'lsa', 'Lsat_1_v5_gn_5_43341' => 'lsa', 'Lsat_1_v5_gn_7_9460' => 'lsa', 'Lsat_1_v5_gn_8_15361' => 'lsa', 'Lsat_1_v5_gn_8_15381' => 'lsa', 'Lsat_1_v5_gn_8_159941' => 'lsa', 'Lsat_1_v5_gn_8_73981' => 'lsa', 'Lsat_1_v5_gn_8_74041' => 'lsa', 'Manes.02G132200' => 'mes', 'Manes.04G103800' => 'mes', 'Manes.04G103900' => 'mes', 'Manes.04G104000' => 'mes', 'Manes.07G117100' => 'mes', 'Manes.11G065100' => 'mes', 'Mapoly0001s0551' => 'mpo', 'Mapoly0053s0048' => 'mpo', 'MBI05_g28385_MAGBIO' => 'mbi', 'MBI05_g28387_MAGBIO' => 'mbi', 'MBI05_g28388_MAGBIO' => 'mbi', 'MBI05_g28389_MAGBIO' => 'mbi', 'MBI10_g40109_MAGBIO' => 'mbi', 'MBI14_g37192_MAGBIO' => 'mbi', 'MBI14_g44884_MAGBIO' => 'mbi', 'MBI14_g44885_MAGBIO' => 'mbi', 'MBI14_g44886_MAGBIO' => 'mbi', 'MBI14_g45256_MAGBIO' => 'mbi', 'MD00G1012600' => 'mdo', 'MD01G1135500' => 'mdo', 'MD07G1200200' => 'mdo', 'MD09G1224300' => 'mdo', 'MD17G1221900' => 'mdo', 'MD17G1222100' => 'mdo', 'Medtr1g080380' => 'mtr', 'Medtr2g095400' => 'mtr', 'Medtr2g097000' => 'mtr', 'Medtr2g097010' => 'mtr', 'Medtr2g097020' => 'mtr', 'Medtr3g067815' => 'mtr', 'Medtr3g067825' => 'mtr', 'Medtr3g067845' => 'mtr', 'Medtr3g067855' => 'mtr', 'Medtr4g006760' => 'mtr', 'Medtr4g046643' => 'mtr', 'Medtr4g060930' => 'mtr', 'Medtr4g125920' => 'mtr', 'Medtr4g126180' => 'mtr', 'Medtr4g126200' => 'mtr', 'Medtr4g131310' => 'mtr', 'Medtr4g131350' => 'mtr', 'Medtr5g079940' => 'mtr', 'MELO3C018160.2' => 'cme', 'MELO3C020627.2' => 'cme', 'MELO3C023675.2' => 'cme', 'MELO3C023862.2' => 'cme', 'MELO3C028793.2' => 'cme', 'Migut.B00243' => 'egut', 'Migut.D01102' => 'egut', 'Migut.D01103' => 'egut', 'Migut.D02082' => 'egut', 'Migut.D02089' => 'egut', 'Migut.E00827' => 'egut', 'Migut.F01450' => 'egut', 'Migut.F01451' => 'egut', 'Migut.I00705' => 'egut', 'Migut.I00718' => 'egut', 'MSTRG.17830' => 'ama', 'MSTRG.21210' => 'ama', 'MSTRG.22790' => 'ama', 'MSTRG.26039' => 'ama', 'MSTRG.283' => 'ama', 'Nitab4.5_0000042g0040' => 'nta', 'Nitab4.5_0000272g0130' => 'nta', 'Nitab4.5_0000376g0240' => 'nta', 'Nitab4.5_0000376g0250' => 'nta', 'Nitab4.5_0000463g0200' => 'nta', 'Nitab4.5_0000561g0020' => 'nta', 'Nitab4.5_0000830g0010' => 'nta', 'Nitab4.5_0000830g0020' => 'nta', 'Nitab4.5_0001097g0010' => 'nta', 'Nitab4.5_0001271g0080' => 'nta', 'Nitab4.5_0001326g0020' => 'nta', 'Nitab4.5_0001326g0150' => 'nta', 'Nitab4.5_0001340g0080' => 'nta', 'Nitab4.5_0001454g0140' => 'nta', 'Nitab4.5_0008565g0030' => 'nta', 'Nitab4.5_0008780g0010' => 'nta', 'Nitab4.5_0011032g0020' => 'nta', 'Nitab4.5_0012768g0020' => 'nta', 'Nn2g11127' => 'nnu', 'Nn2g11128' => 'nnu', 'Nn2g11129' => 'nnu', 'Nn2g12312' => 'nnu', 'Nn5g28140' => 'nnu', 'Oeu004593.1' => 'oeu', 'Oeu009789.1' => 'oeu', 'Oeu010085.1' => 'oeu', 'Oeu011114.2' => 'oeu', 'Oeu016538.1' => 'oeu', 'Oeu018701.1' => 'oeu', 'Oeu021605.1' => 'oeu', 'Oeu033331.1' => 'oeu', 'Oeu047309.1' => 'oeu', 'Oeu048234.1' => 'oeu', 'Oeu053900.1' => 'oeu', 'Oeu062264.1' => 'oeu', 'Oeu064112.1' => 'oeu', 'Os01g0126600' => 'osa', 'Os01g0147400' => 'osa', 'Os01g0147700' => 'osa', 'Os01g0633200' => 'osa', 'Os02g0293300' => 'osa', 'Os03g0596400' => 'osa', 'Os05g0153200' => 'osa', 'Os07g0113100' => 'osa', 'Os12g0572500' => 'osa', 'Peaxi162Scf00223g01312' => 'pax', 'Peaxi162Scf00231g00253' => 'pax', 'Peaxi162Scf00332g00428' => 'pax', 'Peaxi162Scf00332g00429' => 'pax', 'Peaxi162Scf00498g00445' => 'pax', 'Peaxi162Scf00658g00840' => 'pax', 'Peaxi162Scf00774g00120' => 'pax', 'Peaxi162Scf00835g00112' => 'pax', 'Peaxi162Scf00886g00015' => 'pax', 'PGR044G1583' => 'pgr', 'PGR102G0388' => 'pgr', 'PGR102G1289' => 'pgr', 'PGR119G1601' => 'pgr', 'PGR142G1711' => 'pgr', 'PGR142G4279' => 'pgr', 'PGSC0003DMG400004408' => 'stu', 'PGSC0003DMG400022962' => 'stu', 'PGSC0003DMG400023431' => 'stu', 'PGSC0003DMG400024388' => 'stu', 'PGSC0003DMG400028037' => 'stu', 'PGSC0003DMG400030322' => 'stu', 'PGSC0003DMG401014189' => 'stu', 'PGSC0003DMG402014189' => 'stu', 'Phvul.001G232400' => 'pvu', 'Phvul.003G281400' => 'pvu', 'Phvul.008G171200' => 'pvu', 'Phvul.008G232300' => 'pvu', 'Phvul.010G160300' => 'pvu', 'Phvul.L005943' => 'pvu', 'Potri.001G240666' => 'ptr', 'Potri.001G240670' => 'ptr', 'Potri.003G181000' => 'ptr', 'Potri.010G184800' => 'ptr', 'Potri.010G202700' => 'ptr', 'Pp3c13_16540' => 'ppa', 'Pp3c1_15500' => 'ppa', 'Pp3c21_20310' => 'ppa', 'Pp3c21_20330' => 'ppa', 'Pp3c21_20520' => 'ppa', 'Prupe.2G236900' => 'ppe', 'Prupe.3G097000' => 'ppe', 'Prupe.6G075600' => 'ppe', 'Prupe.6G075700' => 'ppe', 'Prupe.6G075800' => 'ppe', 'Psat0s3709g0040' => 'psa', 'Psat0s3709g0160' => 'psa', 'Psat1g174920' => 'psa', 'Psat2g040760' => 'psa', 'Psat2g185120' => 'psa', 'Psat4g149760' => 'psa', 'Psat5g123840' => 'psa', 'Psat5g285000' => 'psa', 'Psat7g259560' => 'psa', 'PSO017G0033' => 'pso', 'PSO017G1155' => 'pso', 'PSO017G1334' => 'pso', 'PSO017G3152' => 'pso', 'PSO017G4927' => 'pso', 'PSO017G6627' => 'pso', 'PSO017G6763' => 'pso', 'PSO017G6832' => 'pso', 'PSO063G1461' => 'pso', 'PSO063G6512' => 'pso', 'PSO063G6843' => 'pso', 'PSO151G0187' => 'pso', 'PSO170G1540' => 'pso', 'PSO170G6543' => 'pso', 'PSO210G0714' => 'pso', 'PSO210G0924' => 'pso', 'PSO210G1028' => 'pso', 'PSO210G1749' => 'pso', 'PSO210G1996' => 'pso', 'PSO210G3367' => 'pso', 'PSO210G4463' => 'pso', 'PSO210G4512' => 'pso', 'PSO210G5767' => 'pso', 'PSO339G0378' => 'pso', 'PSO339G2485' => 'pso', 'PSO339G2574' => 'pso', 'PSO339G3357' => 'pso', 'PSO339G3789' => 'pso', 'PSO339G4838' => 'pso', 'PSO478G0746' => 'pso', 'PSO478G3669' => 'pso', 'PSO478G5148' => 'pso', 'PSO541G3171' => 'pso', 'PSO675G3951' => 'pso', 'PSO675G5935' => 'pso', 'PSO675G6609' => 'pso', 'PSO724G1241' => 'pso', 'PSO781G0044' => 'pso', 'PSO781G0045' => 'pso', 'PSO781G0126' => 'pso', 'PSO781G0269' => 'pso', 'PSO782G0058' => 'pso', 'PSO782G1723' => 'pso', 'PSO782G4378' => 'pso', 'PSO782G4932' => 'pso', 'PSO782G5724' => 'pso', 'PSO801G0014' => 'pso', 'PSO801G0546' => 'pso', 'PSO832G1362' => 'pso', 'PSO832G1713' => 'pso', 'QL01p031634' => 'qlo', 'QL01p031665' => 'qlo', 'QL01p031677' => 'qlo', 'QL01p031684' => 'qlo', 'QL02p059886' => 'qlo', 'QL02p092724' => 'qlo', 'QL03p023906' => 'qlo', 'QL04p025840' => 'qlo', 'QL04p092676' => 'qlo', 'QL04p092714' => 'qlo', 'QL05p058938' => 'qlo', 'QL08p019521' => 'qlo', 'QL08p057225' => 'qlo', 'QL08p059586' => 'qlo', 'QL08p059594' => 'qlo', 'QL08p059601' => 'qlo', 'QL10p052528' => 'qlo', 'QL11p033094' => 'qlo', 'QL12p000692' => 'qlo', 'QL12p038435' => 'qlo', 'QL93p0157_0001' => 'qlo', 'RcHm_v2.0_Chr1g0367771' => 'rch', 'RcHm_v2.0_Chr2g0085841' => 'rch', 'RcHm_v2.0_Chr2g0133161' => 'rch', 'RcHm_v2.0_Chr2g0133171' => 'rch', 'RcHm_v2.0_Chr2g0133201' => 'rch', 'RcHm_v2.0_Chr5g0044861' => 'rch', 'RcHm_v2.0_Chr5g0044871' => 'rch', 'RcHm_v2.0_Chr5g0044881' => 'rch', 'RcHm_v2.0_Chr5g0044991' => 'rch', 'RcHm_v2.0_Chr5g0045041' => 'rch', 'RcHm_v2.0_Chr5g0057601' => 'rch', 'RcHm_v2.0_Chr5g0062541' => 'rch', 'RcHm_v2.0_Chr5g0065061' => 'rch', 'RcHm_v2.0_Chr5g0065071' => 'rch', 'RcHm_v2.0_Chr5g0065081' => 'rch', 'RcHm_v2.0_Chr5g0065111' => 'rch', 'RcHm_v2.0_Chr5g0065241' => 'rch', 'RcHm_v2.0_Chr5g0067621' => 'rch', 'Rhsim01G0154200' => 'rsi', 'Rhsim01G0228300' => 'rsi', 'Rhsim01G0228500' => 'rsi', 'Rhsim01G0228600' => 'rsi', 'Rhsim01G0228900' => 'rsi', 'Rhsim03G0087600' => 'rsi', 'Rhsim03G0129700' => 'rsi', 'Rhsim03G0129800' => 'rsi', 'Rhsim09G0166600' => 'rsi', 'Rhsim12G0187900' => 'rsi', 'Rhsim13G0081900' => 'rsi', 'Rhsim13G0089000' => 'rsi', 'Rhsim13G0174800' => 'rsi', 'Sabra03G0132500' => 'sbr', 'Sabra08G0041400' => 'sbr', 'Sabra10G0142100' => 'sbr', 'Sabra15G0062600' => 'sbr', 'Sabra16G0145500' => 'sbr', 'SalBow3G4189' => 'sbo', 'SalBow6G0228' => 'sbo', 'SalBow6G0251' => 'sbo', 'SalBow6G0368' => 'sbo', 'SalBow6G0577' => 'sbo', 'SalBow6G3298' => 'sbo', 'SalBow6G4841' => 'sbo', 'SalBow6G4882' => 'sbo', 'SalBow6G5283' => 'sbo', 'SalBow6G6126' => 'sbo', 'SalBow6G6411' => 'sbo', 'SalBow6G6497' => 'sbo', 'SalBow6G6895' => 'sbo', 'SalBow7G0417' => 'sbo', 'Sc10g0001670' => 'sci', 'Sc10g0008240' => 'sci', 'Sc14g0004690' => 'sci', 'Sc21g0005840' => 'sci', 'Sed0000180' => 'sed', 'Sed0022378' => 'sed', 'Sed0024690' => 'sed', 'Sed0028116' => 'sed', 'SEGI_19827' => 'sgi', 'SEGI_32878' => 'sgi', 'SGA_v2.0_scaffold203G41517' => 'sas', 'SGA_v2.0_scaffold203G41538' => 'sas', 'SGA_v2.0_scaffold221G42664' => 'sas', 'SGA_v2.0_scaffold221G42672' => 'sas', 'SGA_v2.0_scaffold4892G54556' => 'sas', 'SGA_v2.0_scaffold53G19293' => 'sas', 'SGA_v2.0_scaffold58G20542' => 'sas', 'SGA_v2.0_scaffold5G02769' => 'sas', 'SGA_v2.0_scaffold5G02794' => 'sas', 'SGA_v2.0_scaffold96G28928' => 'sas', 'SHI05940' => 'shi', 'SHI11249' => 'shi', 'SHI22757' => 'shi', 'Solyc01g015050.1' => 'sly', 'Solyc01g015060.1' => 'sly', 'Solyc01g060210.4' => 'sly', 'Solyc01g150139.1' => 'sly', 'Solyc02g077170.3' => 'sly', 'Solyc03g117040.3' => 'sly', 'Solyc05g054420.4' => 'sly', 'Solyc06g005550.3' => 'sly', 'Solyc06g051810.4' => 'sly', 'Solyc06g076200.2' => 'sly', 'Solyc06g076210.3' => 'sly', 'Sopen01g010180' => 'spe', 'Sopen01g010190' => 'spe', 'Sopen01g026360' => 'spe', 'Sopen02g022080' => 'spe', 'Sopen03g035940' => 'spe', 'Sopen05g032910' => 'spe', 'Sopen06g001520' => 'spe', 'Sopen06g011060' => 'spe', 'Sopen06g017820' => 'spe', 'Sopen06g032600' => 'spe', 'Sopen06g032620' => 'spe', 'Sopen06g032640' => 'spe', 'Sopen12g014270' => 'spe', 'Sp1g12150' => 'spa', 'Sp1g14210' => 'spa', 'Sp3g10690' => 'spa', 'Sp3g32940' => 'spa', 'Sp5g13340' => 'spa', 'Sp5g18050' => 'spa', 'Sp5g18070' => 'spa', 'Sp5g18080' => 'spa', 'Sp5g18160' => 'spa', 'Sp5g18190' => 'spa', 'Sp5g34970' => 'spa', 'Sp6g21070' => 'spa', 'Sp7g00920' => 'spa', 'Sp7g00930' => 'spa', 'TAR369G0248' => 'tar', 'TAR369G0349' => 'tar', 'TAR369G0461' => 'tar', 'TAR369G0579' => 'tar', 'TAR383G0294' => 'tar', 'TAR623G0457' => 'tar', 'TAR623G0786' => 'tar', 'TAR623G0793' => 'tar', 'TAR623G0860' => 'tar', 'TAR623G1224' => 'tar', 'TAR625G0369' => 'tar', 'TAR633G1166' => 'tar', 'TAR636G2515' => 'tar', 'THA.LOC104799341' => 'tha', 'THA.LOC104799343' => 'tha', 'THA.LOC104801527' => 'tha', 'THA.LOC104812433' => 'tha', 'Thecc.06G039800' => 'tca', 'Thecc.09G222400' => 'tca', 'Thecc.09G320400' => 'tca', 'Thecc.10G035500' => 'tca', 'Thecc.10G035900' => 'tca', 'Thecc.10G040300' => 'tca', 'Thhalv10003489m.g' => 'esa', 'Thhalv10006952m.g' => 'esa', 'Thhalv10007054m.g' => 'esa', 'Thhalv10010188m.g' => 'esa', 'Thhalv10013147m.g' => 'esa', 'Thhalv10018261m.g' => 'esa', 'Thhalv10019728m.g' => 'esa', 'Thhalv10020282m.g' => 'esa', 'Thhalv10024003m.g' => 'esa', 'TPR.G15839' => 'tpr', 'TPR.G15842' => 'tpr', 'TPR.G24551' => 'tpr', 'TPR.G24553' => 'tpr', 'TPR.G34262' => 'tpr', 'TPR.G34278' => 'tpr', 'TPR.G34301' => 'tpr', 'TPR.G34311' => 'tpr', 'TPR.G3474' => 'tpr', 'TPR.G38731' => 'tpr', 'TPR.G38816' => 'tpr', 'TPR.G38828' => 'tpr', 'TPR.G39271' => 'tpr', 'TPR.G39491' => 'tpr', 'TPR.G5014' => 'tpr', 'TPR.G6825' => 'tpr', 'TPR.G6828' => 'tpr', 'TWI12G1407' => 'twi', 'TWI15G1090' => 'twi', 'TWI18G0140' => 'twi', 'TWI63G1271' => 'twi', 'TWI63G1559' => 'twi', 'TWI75G1439' => 'twi', 'unitig_0.g1559' => 'ugi', 'unitig_21.g20294' => 'ugi', 'unitig_6.g29271' => 'ugi', 'unitig_6.g29272' => 'ugi', 'unitig_736.g22804' => 'ugi', 'unitig_747.g21432' => 'ugi', 'vmacro03066' => 'vma', 'vmacro07180' => 'vma', 'vmacro07181' => 'vma', 'vmacro10225' => 'vma', 'vmacro10227' => 'vma', 'vmacro14376' => 'vma', 'vmacro14377' => 'vma', 'vmacro14511' => 'vma', 'vmacro14513' => 'vma', 'vmacro14533' => 'vma', 'vmacro14535' => 'vma', 'vmacro14536' => 'vma', 'vmacro14537' => 'vma', 'vmacro16859' => 'vma', 'vmacro16860' => 'vma', 'vmacro16861' => 'vma', 'vmacro17243' => 'vma', 'VMungo0251G2766' => 'vmu', 'VMungo0331G1203' => 'vmu', 'VMungo0464G1010' => 'vmu', 'VMungo0647G2048' => 'vmu', 'VMungo0647G2364' => 'vmu', 'VMungo1080G1193' => 'vmu', 'VMungo1383G0652' => 'vmu', 'VMungo1383G2212' => 'vmu', 'Zm00001eb049730' => 'zma', 'Zm00001eb124430' => 'zma', 'Zm00001eb125620' => 'zma', 'Zm00001eb159040' => 'zma', 'Zm00001eb335860' => 'zma', 'Zm00001eb353980' => 'zma', 'Zm00001eb416180' => 'zma' ) $gf_id = 'HOM05D000537' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000537' ) $data_identifier = 'HOM05D000537' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 5, 'aag' => (int) 31, 'ach' => (int) 5, 'amhyb' => (int) 8, 'aly' => (int) 11, 'aox' => (int) 28, 'arhy' => (int) 16, 'ath' => (int) 11, 'atr' => (int) 7, 'acertr' => (int) 15, 'cqu' => (int) 20, 'bca' => (int) 29, 'bol' => (int) 17, 'bra' => (int) 16, 'can' => (int) 16, 'cansat' => (int) 7, 'chi' => (int) 13, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 10, 'cde' => (int) 3, 'cfa' => (int) 7, 'ccl' => (int) 5, 'cil' => (int) 4, 'cla' => (int) 3, 'col' => (int) 6, 'cpa' => (int) 4, 'csa' => (int) 2, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 11, 'dzi' => (int) 7, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 4, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 15, 'ghi' => (int) 20, 'gra' => (int) 14, 'vvi' => (int) 5, 'han' => (int) 17, 'cav' => (int) 6, 'hma' => (int) 3, 'vpl' => (int) 2, 'sun' => (int) 10, 'lal' => (int) 7, 'lonja' => (int) 8, 'lja' => (int) 19, 'lsa' => (int) 16, 'mes' => (int) 6, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 6, 'mtr' => (int) 18, 'cme' => (int) 5, 'egut' => (int) 10, 'ama' => (int) 5, 'nta' => (int) 18, 'nnu' => (int) 5, 'oeu' => (int) 13, 'osa' => (int) 9, 'pax' => (int) 9, 'pgr' => (int) 6, 'stu' => (int) 8, 'pvu' => (int) 6, 'ptr' => (int) 5, 'ppa' => (int) 5, 'ppe' => (int) 5, 'psa' => (int) 9, 'pso' => (int) 50, 'qlo' => (int) 21, 'rch' => (int) 18, 'rsi' => (int) 13, 'sbr' => (int) 5, 'sbo' => (int) 14, 'sci' => (int) 4, 'sed' => (int) 4, 'sgi' => (int) 2, 'sas' => (int) 10, 'shi' => (int) 3, 'sly' => (int) 11, 'spe' => (int) 13, 'spa' => (int) 14, 'tar' => (int) 13, 'tha' => (int) 4, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 17, 'twi' => (int) 6, 'ugi' => (int) 6, 'vma' => (int) 17, 'vmu' => (int) 8, 'zma' => (int) 7 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb416180' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1